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DAVID BALDING University College London |
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POSTAL
ADDRESS: Institute of Genetics University College London 2nd Floor, Kathleen Lonsdale Building 5 Gower Place London WC1E 6BT |
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Phone: Desk +44 (0)20 3108 4005 internal
54005 Mobile +44 (0)75 9025 0432 |
LINKS: |
NEW
SOME FUTURE
EVENTS I AM ORGANISING
SOME
COMMITTEES I AM A MEMBER OF
PEOPLE
WORKING WITH ME:
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PhD Students (see below for past PhD students): |
Post-docs: |
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Charlotte
Vignal (part-time, GSK, started Dec 2004) |
Matt Nunes
(EPSRC, started Aug 2008) |
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Jon
White (part-time, NIAB, started April 07) |
Adaikalavan
Ramasamy (EU, started Jan 08) Joint with NHLI |
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Delilah
Zabaneh (part-time, since 2006) |
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FORMER
POSTDOCS
BOOKS:
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SOFTWARE
The
first two files contain code for calculating the LR, assuming 1 unknown and 2
unknown contributors, respectively. The
code in one or other of these must be executed first. The remaining files provide the input data
for various example analyses: Bates.R and CaseY.R contain the data for the analyses
reported in the FSIG paper; Loco.R contains data from an example published by
Gill et al 2007 (see comments in the file).
For CaseX, the two input files correspond to the full profile, assuming
that major and minor components cannot be confidently distinguished, and the
major component only. None of the code
has been rigorously tested: I plan to be conducting more tests in the near
future.
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PROFESSIONAL
SOCIETIES: |
JOURNALS: |
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Fellow of the Royal Statistical Society (member of
Council 1999-2004). |
AE of International
Statistical Review (1999 – 2005) |
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Member of the International Statistical Institute. |
AE of Biostatistics
(2000 – 2004) |
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Member
of the International Biometric Society
(British & Irish President 2006-08) |
AE of Human
Genomics (2003 – 2006) |
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Member of the International Genetic
Epidemiology Society |
AE of Annals of
Human Genetics (2004 – ) |
BACKGROUND:
PAST PhD STUDENTS:
CONSULTINGand
SHORT COURSES
I offer a statistical consulting service, primarily to lawyers. Most often I
advise on statistical aspects of the interpretation of DNA profile evidence, but
I have also provided advice on a variety of other statistical aspects of
forensic science, epidemiology and other fields.
2007
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Leschziner
GD, Jorgensen AL, Andrew T, Williamson PR + 3 authors + Balding DJ + 3 authors + Johnson MR, Pirmohamed M, The association
between polymorphisms in RLIP76 and drug response in epilepsy, Pharmacogenomics, 8(12): 1715-1722, 2007.
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Hoggart CJ, Chadeau-Hyams M, Clark TG, Lampariello R, De
Iorio M, Whittaker JC, Balding DJ, Sequence-level population
simulations over large genomic regions,
Genetics 177: 1725–1731, 2007 doi:10.1534/genetics.106.069088
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Balding DJFunctional
constraint and small insertions and deletions in the ENCODE regions of the
human genome Genome Biology, 8:R180, 2007 doi:10.1186/gb-2007-8-9-r180
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Graffelman J; Balding DJ; Gonzalez A;
Bertranpetit J. Variation in Estimated
Recombination Rates across Human Populations, Human Genetics, 122(3-4):301-310,
2007. doi:10.1007/s00439-007-0391-6
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Leschziner GD; Andrew T; Leach JP; Chadwick D; Coffey AJ; Balding DJ;
Bentley DR; Pirmohamed M; Johnson MR. Common
ABCB1 polymorphisms are not associated with multidrug resistance in epilepsy
using a gene-wide tagging approach, Pharmacogenetics
and Genomics 17: 217-220, 2007.
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A
genome-wide association study identifies novel risk loci for type 2 diabetes,
Sladek R, Rocheleau G, Rung J, Dina C + 14 authors + Balding DJ, Meyre
D, Polychronakos C, Froguel P, Nature
445:
881-885 2007.
doi:10.1038/nature05616
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Family-based
association analysis with ordered categorical phenotypes, covariates and
interactions, Baksh MF, Balding DJ, Vyse TJ, Whittaker JC, Genetic Epidemiology 31(1): 1-8, 2007. doi:10.1002/gepi.20183
2006
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A tutorial on statistical methods for population
association studies, Balding DJ, Nature Reviews Genetics 7: 781-791, 2006. doi:10.1038/nrg1916
· Clinical factors and ABCB1 polymorphisms in prediction of antiepileptic drug response: a prospective cohort study, Leschziner G, Jorgensen AL, Andrew T, Pirmohamed M, Williamson PR, Marson AG, Coffey AJ, Middleditch C, Rogers J, Bentley DR, Chadwick DW, Balding DJ, Johnson MR, Lancet Neurology 5: 668–76, 2006.
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Exon
sequencing and high resolution haplotype analysis of ABC transporter genes
implicated in drug resistance, Leschzinger G, Zabaneh D, Pirmohamed M, Owen A,
Rogers J, Coffey AJ, Balding DJ, Bentley DB & Johnson MR, Pharmacogenetics and Genomics, 16: 439-450, 2006.
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Discrimination
of half-siblings when maternal genotypes are known, LR Mayor & Balding
DJ, Forensic Science International, 159(2-3): 141-147, 2006. doi:10.1016/j.forsciint.2005.07.007
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Fine
mapping of disease genes via haplotype clustering, ERB Waldron, JC Whittaker
& Balding DJ, Genetic
Epidemiology, 30: 170-179, 2006 Software
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Logistic
regression protects against population structure in genetic association studies,
E Setakis, H Stirnadel & Balding DJ, Genome Research, 16:
290-296, 2006.
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A
family-based association test with a complex phenotype, covariates and
interactions: assessing CRP and lupus, Baksh MF, Balding DJ, Vyse TJ
& Whittaker JC, Annals of Human Genetics
70: 131-139, 2006.
2003-2005
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Paternity
index calculations when some individuals share commonancestry, KL Ayres & Balding
DJ, Forensic Science International, 151(1): 101-103, 2005.
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The
impact of low-cost, genome-wide resequencing on association studies,Balding
DJ, editorial for Human
Genomics, 2(2): 79-80, 2005.
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A
question of identity, Balding DJ,
Significance, 2(1): 20-23, March 2005.
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Identifying
adaptive genetic divergence amongpopulations from genome scans, MA Beaumont
& DJB, Molecular Ecology, 13:969-980,2004. Software
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Clustering
of protein domains in the human genome, LRMayor, KP Fleming, A Müller, DJB
& MJ Sternberg, Journal
of MolecularBiology, 340(5): 991-1004,2004.
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Little
loss of information due to unknown phase forfine-scale LD mapping with SNP
genotype data, AP Morris, JC Whittaker
& DJB, American Journal
ofHuman Genetics, 74(5):945-953,2004.
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Multipoint
LD mapping narrows location interval andidentifies mutation heterogeneity, A.
Morris, J. Whittaker, C-F Xu, LHosking& DJB, Proceedings of theNationalAcademy of Sciences of the USA 100(23):13442–13446,2003.
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Gametic
phase estimation over large genomic regionsusing an adaptive window approach, L.
Excoffier, G. Laval & DJB, Human
Genomics 1(1): 7-19, 2003.
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Handbookof
Statistical Genetics, 2nd edition, DJB, M.Bishop, & C. Cannings (Eds),
Chichester:Wiley, 2003.
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Inferences
from DNA data: population histories,evolutionary processes, and forensic match
probabilities, I.J. Wilson, M.E.Weale & DJB, read before the Royal
Statistical Society, November 2002, Journalof
the Royal Statistical Society
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Likelihood-based
inference for genetic correlationcoefficients, DJB, Theoretical Population Biology,
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Chromosome-wide
distribution of haplotype blocks andthe role of recombination hotspots, M.S.
Phillips, R. Lawrence, R.Sachidanandam, A.P. Morris, DJB, + 29 authors + L.R.
Cardon, NatureGenetics,
33:382-387,2003.
2000-2002
1997-1999
1994-1996
1985
- 1993